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graflo.db.nebula

NebulaGraph database implementation.

Supports NebulaGraph 3.x (nGQL via nebula3-python) and 5.x (ISO GQL via nebula5-python).

NebulaConnection

Bases: Connection

NebulaGraph implementation of the Connection interface.

Automatically selects the correct Python driver and query language based on config.version:

  • v3.x -- nebula3-python, nGQL
  • v5.x -- nebula5-python, ISO GQL / Cypher
Source code in graflo/db/nebula/conn.py
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class NebulaConnection(Connection):
    """NebulaGraph implementation of the ``Connection`` interface.

    Automatically selects the correct Python driver and query language based on
    ``config.version``:

    * **v3.x** -- ``nebula3-python``, nGQL
    * **v5.x** -- ``nebula5-python``, ISO GQL / Cypher
    """

    flavor: ClassVar[DBType] = DBType.NEBULA

    def __init__(self, config: NebulaConfig):
        super().__init__()
        self.config = config
        self._adapter: NebulaClientAdapter = create_adapter(config)
        self._space_name: str | None = None
        self._tag_fields: dict[str, list[str]] = {}

        if config.schema_name:
            try:
                self._use_space(config.schema_name)
            except Exception:
                pass

    # ------------------------------------------------------------------
    # Expression flavour override (instance-level, depends on version)
    # ------------------------------------------------------------------

    @classmethod
    def expression_flavor(cls) -> ExpressionFlavor:
        return ExpressionFlavor.NGQL

    def _expression_flavor(self) -> ExpressionFlavor:
        """Instance-level flavour dispatch."""
        if self.config.is_v3:
            return ExpressionFlavor.NGQL
        return ExpressionFlavor.CYPHER

    # ------------------------------------------------------------------
    # Internal helpers
    # ------------------------------------------------------------------

    def _execute(self, statement: str) -> NebulaResultSet:
        return self._adapter.execute(statement)

    def _use_space(self, space_name: str) -> None:
        self._adapter.use_space(space_name)
        self._space_name = space_name
        self._load_tag_fields()

    def _load_tag_fields(self) -> None:
        """Discover existing tags and their fields from the current space."""
        try:
            rs = self._adapter.execute("SHOW TAGS")
            tag_names = [r.get("Name", r.get("name", "")) for r in rs.rows_as_dicts()]
        except Exception:
            return
        for tag in tag_names:
            if not tag:
                continue
            try:
                desc = self._adapter.execute(f"DESCRIBE TAG `{tag}`")
                self._tag_fields[tag] = [
                    r.get("Field", r.get("field", "")) for r in desc.rows_as_dicts()
                ]
            except Exception:
                pass

    def _wait_for_dml_ready(self, tag_name: str) -> None:
        """Wait until DML operations are possible on a tag.

        NebulaGraph's storaged schema cache may lag behind graphd's metadata
        cache by several heartbeat cycles (~10 s with default settings).
        ``DESCRIBE TAG`` succeeds immediately, but DML like ``FETCH PROP`` or
        ``UPSERT VERTEX`` fails until the storage cache is warm.
        """
        import time

        check = f'FETCH PROP ON `{tag_name}` "__dml_check__" YIELD properties(vertex)'
        for attempt in range(_SCHEMA_WAIT_RETRIES):
            try:
                self._adapter.execute(check)
                logger.debug(
                    "DML ready for tag '%s' after %d attempt(s)", tag_name, attempt + 1
                )
                return
            except Exception:
                if attempt == _SCHEMA_WAIT_RETRIES - 1:
                    logger.warning(
                        "DML readiness check for tag '%s' did not succeed "
                        "after %d attempts",
                        tag_name,
                        _SCHEMA_WAIT_RETRIES,
                    )
                time.sleep(_SCHEMA_WAIT_INTERVAL)

    def _wait_for_edge_dml_ready(self, edge_type: str) -> None:
        """Wait until DML operations are possible on an edge type."""
        import time

        check = (
            f'FETCH PROP ON `{edge_type}` "__src__"->"__dst__" YIELD properties(edge)'
        )
        for attempt in range(_SCHEMA_WAIT_RETRIES):
            try:
                self._adapter.execute(check)
                logger.debug(
                    "DML ready for edge '%s' after %d attempt(s)",
                    edge_type,
                    attempt + 1,
                )
                return
            except Exception:
                if attempt == _SCHEMA_WAIT_RETRIES - 1:
                    logger.warning(
                        "DML readiness check for edge '%s' did not succeed "
                        "after %d attempts",
                        edge_type,
                        _SCHEMA_WAIT_RETRIES,
                    )
                time.sleep(_SCHEMA_WAIT_INTERVAL)

    def _render_filter(self, filters: Any, doc_name: str) -> str:
        if self.config.is_v3:
            return render_filters_ngql(filters, doc_name)
        return render_filters_cypher(filters, doc_name)

    def _tag_field_names(self, tag_name: str) -> list[str]:
        return self._tag_fields.get(tag_name, [])

    # ------------------------------------------------------------------
    # Connection ABC – lifecycle
    # ------------------------------------------------------------------

    def execute(self, query: str | Any, **kwargs: Any) -> Any:
        rs = self._execute(str(query))
        return rs

    def close(self) -> None:
        self._adapter.close()

    # ------------------------------------------------------------------
    # Database (space) management
    # ------------------------------------------------------------------

    def _ensure_storage_hosts(self) -> None:
        """Register storaged hosts if not already present (v3.x requirement)."""
        if not self.config.storaged_addresses:
            return
        try:
            rs = self._adapter.execute("SHOW HOSTS")
            existing = {
                f"{r.get('Host', '')}:{r.get('Port', '')}" for r in rs.rows_as_dicts()
            }
        except Exception:
            existing = set()

        for addr in self.config.storaged_addresses:
            if addr not in existing:
                try:
                    host, port = addr.rsplit(":", 1)
                    self._adapter.execute(f'ADD HOSTS "{host}":{port}')
                    logger.info("Registered storage host %s", addr)
                except Exception:
                    logger.debug("ADD HOSTS %s (may already exist)", addr)

        import time

        for _ in range(30):
            try:
                rs = self._adapter.execute("SHOW HOSTS")
                statuses = [r.get("Status", "") for r in rs.rows_as_dicts()]
                if statuses and all(s == "ONLINE" for s in statuses):
                    return
            except Exception:
                pass
            time.sleep(1)
        logger.warning("Storage hosts may not all be ONLINE yet")

    def create_database(self, name: str) -> None:
        self._ensure_storage_hosts()
        stmt = create_space_ngql(
            name,
            vid_type=self.config.vid_type,
            partition_num=self.config.partition_num,
            replica_factor=self.config.replica_factor,
        )
        self._execute(stmt)
        wait_for_space_ready(
            self._adapter,
            name,
            max_retries=_SCHEMA_WAIT_RETRIES,
            interval=_SCHEMA_WAIT_INTERVAL,
        )
        self._use_space(name)
        logger.info("Created NebulaGraph space '%s'", name)

    def delete_database(self, name: str) -> None:
        self._execute(drop_space_ngql(name))
        logger.info("Dropped NebulaGraph space '%s'", name)

    # ------------------------------------------------------------------
    # Schema definition
    # ------------------------------------------------------------------

    def define_schema(self, schema: Schema) -> None:
        self.define_vertex_classes(schema)
        edges = list(schema.core_schema.edge_config.values())
        self.define_edge_classes(edges)

    def define_vertex_classes(self, schema: Schema) -> None:
        for vname in schema.core_schema.vertex_config.vertex_set:
            fields = schema.core_schema.vertex_config.fields(vname)
            stmt = create_tag_ngql(vname, fields)
            self._execute(stmt)
            self._tag_fields[vname] = [f.name for f in fields]
            logger.debug("Created tag '%s'", vname)

        if schema.core_schema.vertex_config.vertex_set:
            sample_tag = next(iter(schema.core_schema.vertex_config.vertex_set))
            self._wait_for_dml_ready(sample_tag)

    def define_edge_classes(self, edges: list[Edge]) -> None:
        created: set[str] = set()
        for edge in edges:
            rel = edge.relation or f"{edge.source}_{edge.target}"
            if rel in created:
                continue
            edge_fields = []
            if edge.weights and edge.weights.direct:
                edge_fields = list(edge.weights.direct)
            stmt = create_edge_type_ngql(rel, edge_fields)
            self._execute(stmt)
            created.add(rel)
            logger.debug("Created edge type '%s'", rel)

        if created:
            sample_et = next(iter(created))
            self._wait_for_edge_dml_ready(sample_et)

    # ------------------------------------------------------------------
    # Index management
    # ------------------------------------------------------------------

    def define_vertex_indexes(
        self, vertex_config: VertexConfig, schema: Schema | None = None
    ) -> None:
        if schema is None:
            logger.warning(
                "Schema is None: identity indexes cannot be ensured without schema"
            )
        for vname in vertex_config.vertex_set:
            fields = vertex_config.fields(vname)
            string_fields = {f.name for f in fields if f.type == FieldType.STRING}
            index_list = (
                schema.db_profile.vertex_secondary_indexes(vname)
                if schema is not None
                else []
            )

            # Nebula requires TAG indexes for LOOKUP and many property-filtered MATCH
            # plans. Keep identity index creation implicit so schemas without
            # explicit database_features remain queryable/clearable.
            identity_idx = Index(fields=vertex_config.identity_fields(vname))
            all_indexes = [identity_idx, *index_list]

            seen: set[tuple[str, ...]] = set()
            for idx in all_indexes:
                key = tuple(str(f) for f in idx.fields)
                if not key or key in seen:
                    continue
                seen.add(key)
                self._add_tag_index(vname, idx, string_fields=string_fields)

    def define_edge_indexes(
        self, edges: list[Edge], schema: Schema | None = None
    ) -> None:
        for edge in edges:
            rel = edge.relation or f"{edge.source}_{edge.target}"
            index_list = (
                schema.db_profile.edge_secondary_indexes(edge.edge_id)
                if schema is not None
                else []
            )
            for idx in index_list:
                self._add_edge_index(rel, idx)

    def _add_tag_index(
        self,
        tag_name: str,
        index: Index,
        string_fields: set[str] | None = None,
    ) -> None:
        idx_fields = [str(f) for f in index.fields]
        idx_name = f"idx_{tag_name}_{'_'.join(idx_fields)}"
        stmt = create_tag_index_ngql(
            idx_name, tag_name, idx_fields, string_fields=string_fields
        )
        try:
            self._execute(stmt)
            self._rebuild_index(idx_name, kind="TAG")
            logger.debug("Created tag index '%s'", idx_name)
        except Exception as e:
            logger.debug("Tag index '%s' note: %s", idx_name, e)

    def _add_edge_index(self, edge_type: str, index: Index) -> None:
        idx_fields = [str(f) for f in index.fields]
        idx_name = f"idx_{edge_type}_{'_'.join(idx_fields)}"
        stmt = create_edge_index_ngql(idx_name, edge_type, idx_fields)
        try:
            self._execute(stmt)
            self._rebuild_index(idx_name, kind="EDGE")
            logger.debug("Created edge index '%s'", idx_name)
        except Exception as e:
            logger.debug("Edge index '%s' note: %s", idx_name, e)

    def _rebuild_index(self, idx_name: str, kind: str = "TAG") -> None:
        """Rebuild an index, waiting for propagation first, then for completion."""
        import time

        rebuild_stmt = f"REBUILD {kind} INDEX `{idx_name}`"
        for attempt in range(_SCHEMA_WAIT_RETRIES):
            try:
                self._adapter.execute(rebuild_stmt)
                break
            except Exception:
                if attempt == _SCHEMA_WAIT_RETRIES - 1:
                    logger.warning("Could not start rebuild for '%s'", idx_name)
                    return
                time.sleep(_SCHEMA_WAIT_INTERVAL)

        for _ in range(_SCHEMA_WAIT_RETRIES):
            try:
                rs = self._adapter.execute(f"SHOW {kind} INDEX STATUS")
                for row in rs.rows_as_dicts():
                    name = row.get("Name", row.get("name", ""))
                    status = row.get("Index Status", row.get("index_status", ""))
                    if name == idx_name and status.upper() == "FINISHED":
                        return
            except Exception:
                pass
            time.sleep(_SCHEMA_WAIT_INTERVAL)
        logger.warning("Index rebuild for '%s' may not be complete", idx_name)

    # ------------------------------------------------------------------
    # init_db
    # ------------------------------------------------------------------

    def init_db(self, schema: Schema, recreate_schema: bool) -> None:
        space_name = self.config.schema_name
        if not space_name:
            space_name = schema.metadata.name
            self.config.schema_name = space_name

        if recreate_schema:
            try:
                self.delete_database(space_name)
            except Exception:
                pass
            self.create_database(space_name)
        else:
            try:
                self.create_database(space_name)
            except Exception:
                # Space may already exist
                wait_for_space_ready(
                    self._adapter,
                    space_name,
                    max_retries=_SCHEMA_WAIT_RETRIES,
                    interval=_SCHEMA_WAIT_INTERVAL,
                )
                self._use_space(space_name)

            # Check if tags already exist
            try:
                rs = self._execute("SHOW TAGS")
                rows = rs.rows_as_dicts()
                if rows:
                    raise SchemaExistsError(
                        f"Schema already exists in space '{space_name}' "
                        f"({len(rows)} tags). Set recreate_schema=True to replace."
                    )
            except SchemaExistsError:
                raise
            except Exception:
                pass

        self.define_schema(schema)
        self.define_indexes(schema)

    # ------------------------------------------------------------------
    # Data clearing
    # ------------------------------------------------------------------

    def clear_data(self, schema: Schema) -> None:
        for vname in schema.core_schema.vertex_config.vertex_set:
            try:
                self._execute(
                    f"LOOKUP ON `{vname}` YIELD id(vertex) AS vid "
                    f"| DELETE VERTEX $-.vid"
                )
            except Exception as e:
                logger.debug("clear_data for tag '%s': %s", vname, e)

    def delete_graph_structure(
        self,
        vertex_types: tuple[str, ...] | list[str] = (),
        graph_names: tuple[str, ...] | list[str] = (),
        delete_all: bool = False,
    ) -> None:
        if delete_all:
            space_name = self._space_name or self.config.schema_name
            if space_name:
                self.delete_database(space_name)
            return

        for vt in vertex_types:
            try:
                self._execute(f"DROP TAG IF EXISTS `{vt}`")
            except Exception as e:
                logger.warning("Failed to drop tag '%s': %s", vt, e)

        for gn in graph_names:
            try:
                self._execute(drop_space_ngql(gn))
            except Exception as e:
                logger.warning("Failed to drop space '%s': %s", gn, e)

    # ------------------------------------------------------------------
    # Document operations
    # ------------------------------------------------------------------

    def upsert_docs_batch(
        self,
        docs: list[dict[str, Any]],
        class_name: str,
        match_keys: list[str] | tuple[str, ...],
        **kwargs: Any,
    ) -> None:
        dry = kwargs.pop("dry", False)
        if not docs:
            return

        match_keys_list = list(match_keys)
        tag_fields = self._tag_field_names(class_name)
        if not tag_fields:
            tag_fields = list({k for doc in docs for k in doc})

        statements = batch_upsert_vertices_ngql(
            class_name, docs, match_keys_list, tag_fields
        )
        if dry or not statements:
            return

        # Execute in batches to avoid hitting statement-size limits
        batch_size = 50
        for i in range(0, len(statements), batch_size):
            chunk = statements[i : i + batch_size]
            combined = "; ".join(chunk)
            self._execute(combined)

    def insert_edges_batch(
        self,
        docs_edges: list[list[dict[str, Any]]] | list[Any] | None,
        source_class: str,
        target_class: str,
        relation_name: str,
        match_keys_source: tuple[str, ...],
        match_keys_target: tuple[str, ...],
        filter_uniques: bool = True,
        head: int | None = None,
        **kwargs: Any,
    ) -> None:
        opts = consume_insert_edges_kwargs(kwargs)
        dry = opts.dry

        if not docs_edges:
            return

        if head is not None:
            docs_edges = docs_edges[:head]

        # Build (src_vid, dst_vid, props) tuples
        edge_tuples: list[tuple[str, str, dict[str, Any]]] = []
        for edge_doc in docs_edges:
            if not isinstance(edge_doc, (list, tuple)) or len(edge_doc) < 2:
                continue
            src_doc = edge_doc[0] if isinstance(edge_doc[0], dict) else {}
            dst_doc = edge_doc[1] if isinstance(edge_doc[1], dict) else {}
            props = (
                edge_doc[2]
                if len(edge_doc) > 2 and isinstance(edge_doc[2], dict)
                else {}
            )

            src_vid = make_vid(src_doc, list(match_keys_source))
            dst_vid = make_vid(dst_doc, list(match_keys_target))
            edge_tuples.append((src_vid, dst_vid, props))

        if dry or not edge_tuples:
            return

        # Determine edge property fields from schema or from data
        all_prop_keys: set[str] = set()
        for _, _, p in edge_tuples:
            all_prop_keys.update(p.keys())
        edge_fields = sorted(all_prop_keys) if all_prop_keys else None

        batch_size = 200
        for i in range(0, len(edge_tuples), batch_size):
            chunk = edge_tuples[i : i + batch_size]
            stmt = insert_edges_ngql(relation_name, chunk, edge_fields)
            if stmt:
                self._execute(stmt)

    def insert_return_batch(
        self, docs: list[dict[str, Any]], class_name: str
    ) -> list[dict[str, Any]] | str:
        raise NotImplementedError(
            "insert_return_batch is not implemented for NebulaGraph"
        )

    # ------------------------------------------------------------------
    # Fetch operations
    # ------------------------------------------------------------------

    def fetch_docs(
        self,
        class_name: str,
        filters: list[Any] | dict[str, Any] | None = None,
        limit: int | None = None,
        return_keys: list[str] | None = None,
        unset_keys: list[str] | None = None,
        **kwargs: Any,
    ) -> list[dict[str, Any]]:
        if self.config.is_v3:
            doc_name = f"v.`{class_name}`"
            fc = self._render_filter(filters, doc_name)
            q = fetch_docs_ngql(class_name, fc, limit, return_keys)
        else:
            fc = self._render_filter(filters, "v")
            q = fetch_docs_gql(class_name, fc, limit, return_keys)

        rs = self._execute(q)
        rows = rs.rows_as_dicts()

        if return_keys:
            return rows

        result: list[dict[str, Any]] = []
        for row in rows:
            v = row.get("v", row)
            if isinstance(v, dict) and "tags" in v:
                props: dict[str, Any] = {}
                for tag_props in v["tags"].values():
                    props.update(tag_props)
                result.append(props)
            elif isinstance(v, dict):
                result.append(v)
            else:
                result.append(row)
        return result

    def fetch_edges(
        self,
        from_type: str,
        from_id: str,
        edge_type: str | None = None,
        to_type: str | None = None,
        to_id: str | None = None,
        filters: list[Any] | dict[str, Any] | None = None,
        limit: int | None = None,
        return_keys: list[str] | None = None,
        unset_keys: list[str] | None = None,
        **kwargs: Any,
    ) -> list[dict[str, Any]]:
        fc = ""
        if filters is not None:
            if not isinstance(filters, FilterExpression):
                ff = FilterExpression.from_dict(filters)
            else:
                ff = filters
            fc = str(ff(doc_name="e", kind=self._expression_flavor()))

        q = fetch_edges_ngql(
            from_type,
            from_id,
            edge_type=edge_type,
            to_tag=to_type,
            to_vid=to_id,
            filter_clause=fc,
            limit=limit,
        )
        rs = self._execute(q)
        rows = rs.rows_as_dicts()

        result: list[dict[str, Any]] = []
        for row in rows:
            entry = row.get("props", row)
            if isinstance(entry, dict):
                entry["_src"] = row.get("src", "")
                entry["_dst"] = row.get("dst", "")
                entry["_type"] = row.get("edge_type", "")
            if return_keys and isinstance(entry, dict):
                entry = {k: entry.get(k) for k in return_keys}
            result.append(entry)
        return result

    # ------------------------------------------------------------------
    # Presence / absence checks
    # ------------------------------------------------------------------

    def fetch_present_documents(
        self,
        batch: list[dict[str, Any]],
        class_name: str,
        match_keys: list[str] | tuple[str, ...],
        keep_keys: list[str] | tuple[str, ...] | None = None,
        flatten: bool = False,
        filters: list[Any] | dict[str, Any] | None = None,
    ) -> list[dict[str, Any]]:
        if not batch:
            return []

        results: list[dict[str, Any]] = []
        for doc in batch:
            vid = make_vid(doc, list(match_keys))
            try:
                rs = self._execute(
                    f'FETCH PROP ON `{class_name}` "{vid}" '
                    f"YIELD properties(vertex) AS props"
                )
                rows = rs.rows_as_dicts()
                for row in rows:
                    props = row.get("props", row)
                    if isinstance(props, dict):
                        if keep_keys:
                            props = {k: props.get(k) for k in keep_keys}
                        results.append(props)
            except Exception as e:
                logger.debug("fetch_present_documents error for vid '%s': %s", vid, e)

        return results

    def keep_absent_documents(
        self,
        batch: list[dict[str, Any]],
        class_name: str,
        match_keys: list[str] | tuple[str, ...],
        keep_keys: list[str] | tuple[str, ...] | None = None,
        filters: list[Any] | dict[str, Any] | None = None,
    ) -> list[dict[str, Any]]:
        if not batch:
            return []

        present = self.fetch_present_documents(
            batch, class_name, match_keys, list(match_keys), filters=filters
        )
        present_keys: set[tuple[Any, ...]] = set()
        for doc in present:
            key_tuple = tuple(doc.get(k) for k in match_keys)
            present_keys.add(key_tuple)

        absent: list[dict[str, Any]] = []
        for doc in batch:
            key_tuple = tuple(doc.get(k) for k in match_keys)
            if key_tuple not in present_keys:
                if keep_keys:
                    absent.append({k: doc.get(k) for k in keep_keys})
                else:
                    absent.append(doc)
        return absent

    # ------------------------------------------------------------------
    # Aggregation
    # ------------------------------------------------------------------

    def aggregate(
        self,
        class_name: str,
        aggregation_function: AggregationType,
        discriminant: str | None = None,
        aggregated_field: str | None = None,
        filters: list[Any] | dict[str, Any] | None = None,
    ) -> int | float | list[dict[str, Any]] | dict[str, int | float] | None:
        agg_name = (
            aggregation_function.value
            if isinstance(aggregation_function, AggregationType)
            else str(aggregation_function)
        )
        if agg_name == "AVERAGE":
            agg_name = "AVG"

        if self.config.is_v3:
            doc_name = f"v.`{class_name}`"
            fc = self._render_filter(filters, doc_name)
            q = aggregate_ngql(class_name, agg_name, discriminant, aggregated_field, fc)
        else:
            fc = self._render_filter(filters, "v")
            q = aggregate_gql(class_name, agg_name, discriminant, aggregated_field, fc)

        rs = self._execute(q)
        rows = rs.rows_as_dicts()

        if agg_name == "COUNT" and discriminant:
            return {row["key"]: row["count"] for row in rows}
        if agg_name == "COUNT":
            return rows[0]["count"] if rows else 0
        if agg_name == "SORTED_UNIQUE":
            return [row["val"] for row in rows]
        if rows:
            return rows[0].get("val")
        return None